| 1 | Robbie Villarica | 52.58 | 57.83 | 1:00.10 56.88 52.58 56.52 1:05.30 |
| 2 | Enika Aubrey Maninang | 54.81 | 1:00.29 | 1:05.40 57.59 1:05.23 58.06 54.81 |
| 3 | Don Angelo Joson | 55.61 | 1:02.63 | 1:01.35 1:05.51 55.61 DNF 1:01.04 |
| 4 | Jaden Lim | 1:04.80 | 1:11.18 | 1:13.22 1:04.80 1:09.68 1:12.09 1:11.78 |
| 5 | John Howard Tuting Briz | 58.71 | 1:15.91 | 1:12.85 1:21.97 1:12.91 58.71 1:29.06 |
| 6 | Kaidrich Keolo Pobre | 1:04.43 | 1:20.61 | 1:22.74 1:22.58 1:16.52 1:04.43 1:25.63 |
| 7 | Yuji Yoshida | 1:19.56 | 1:24.63 | 1:19.56 1:25.50 1:23.64 1:39.36 1:24.75 |
| 8 | Jolo Endona | 1:24.52 | 1:29.34 | 1:49.28 1:34.57 1:27.38 1:24.52 1:26.08 |
| 9 | Louie Jay Quibote | 1:18.34 | 1:29.91 | 1:35.78 1:23.29 1:31.61 1:34.84 1:18.34 |
| 10 | Emanuel Capule | 1:17.16 | 1:32.12 | 1:43.90 1:17.16 1:29.27 1:38.85 1:28.24 |
| 11 | Maverick Sua | 1:33.42 | 1:35.27 | 1:33.42 1:41.33 1:36.37 1:35.09 1:34.34 |
| 12 | Luigi Angelo Enghoy | 1:23.87 | 1:36.41 | 1:38.87 1:41.95 1:36.78 1:33.58 1:23.87 |
| 13 | Alexandre Ravel | 1:36.22 | 1:40.57 | 1:46.14 1:37.72 1:36.22 1:42.46 1:41.52 |
| 14 | Brenton Angelo Lo Wong | 1:34.90 | 1:42.68 | 1:34.90 1:45.32 1:50.58 1:39.99 1:42.74 |
| 15 | Jhonder Amparo Tanyag | 1:39.47 | 1:49.54 | 2:01.26 1:58.92 1:46.54 1:39.47 1:43.17 |
| 16 | Bille Janssen Lagarde | 1:41.98 | 1:49.91 | 1:57.10 1:44.52 1:41.98 1:48.11 2:11.16 |
| 17 | Christian F. Gortayo | 1:46.46 | 1:51.13 | 2:08.34 1:51.68 1:47.84 1:53.87 1:46.46 |
| 18 | Lorenzo Layug | 1:42.93 | 1:56.77 | 1:42.93 1:58.84 1:55.95 1:55.53 1:58.84 |
| 19 | Milbert Ray Sasi | 1:51.73 | 2:04.54 | 2:08.72 1:51.73 2:04.14 2:00.77 2:15.64 |
| 20 | Franzen Rovic Ojenar | 1:34.65 | DNF | 1:43.87 2:21.85 1:34.65 DNF DNF |
| 21 | Lorenzo Franco Kasilag | 2:15.93 | — | 2:15.93 2:31.67 — — — |
| 22 | Nathaniel Rivera Libre | 2:19.48 | — | 2:19.48 2:29.93 — — — |
| 23 | Josh Patrick Buatis | 2:28.50 | — | 2:28.50 DNF — — — |
| 24 | Qays Khairy Gadat | 2:41.36 | — | 2:42.60 2:41.36 — — — |
| 25 | Christian Lacquio | 2:46.36 | — | 4:40.48 2:46.36 — — — |
| 26 | Julian Doblon | 3:00.45 | — | 3:11.45 3:00.45 — — — |
| 27 | Joseph Manuel A. Cagape | 3:03.53 | — | 3:55.78 3:03.53 — — — |
| 28 | Juan Carlo S. Hernandez | 3:23.46 | — | 4:44.73 3:23.46 — — — |
| 29 | Simon Peter Reyes | 5:20.55 | — | DNF 5:20.55 — — — |