| 1 | Daniel Wallin | 31.27 | 33.78 | 35.92 33.31 40.43 31.27 32.11 |
| 2 | Vilius Ribinskas | 40.77 | 45.47 | 41.37 40.77 48.97 46.08 49.19 |
| 3 | Dmitry Kryuzban | 42.73 | 45.50 | 42.73 47.19 44.96 44.67 46.86 |
| 4 | Aleksandr Beznogov | 46.02 | 1:01.35 | 57.97 46.02 59.90 1:06.17 1:39.02 |
| 5 | Martti Elvisto | 1:02.34 | 1:07.16 | 1:09.07 1:02.84 1:10.46 1:09.58 1:02.34 |
| 6 | Uku Kruusamägi | 1:08.38 | 1:13.27 | 1:08.38 1:12.68 1:11.12 1:23.71 1:16.01 |
| 7 | Kert Jalukse | 1:11.25 | 1:15.84 | 1:17.19 1:16.72 1:11.25 1:13.61 1:17.61 |
| 8 | Jan Erik Soosaar | 1:17.24 | 1:20.99 | 1:23.45 1:17.24 1:31.36 1:19.40 1:20.11 |
| 9 | Andreas Pung | 1:17.68 | 1:21.05 | 1:17.68 1:36.32 1:23.03 1:22.33 1:17.80 |
| 10 | Gert Kevin Aamisepp | 1:19.67 | 1:24.56 | 1:25.84 1:25.35 1:22.48 1:19.67 1:36.59 |
| 11 | Rio Truija | 1:28.75 | 1:35.51 | 1:28.75 1:47.11 1:36.29 1:28.97 1:41.27 |
| 12 | Andris Lukijans | 1:23.41 | 1:36.00 | 1:29.89 1:43.55 1:37.63 1:23.41 1:40.49 |
| 13 | Remo Pihel | 1:41.43 | 1:53.35 | 1:58.80 1:41.43 2:01.82 1:54.10 1:47.16 |
| 14 | Andrei Solntsev | 1:41.90 | 1:59.37 | 1:50.15 2:23.92 2:00.59 1:41.90 2:07.36 |
| 15 | Diana Murnik | 1:53.18 | 2:09.27 | 2:01.26 1:57.65 2:45.33 1:53.18 2:28.89 |
| 16 | David Nugis | 2:09.95 | 2:19.44 | 3:22.71 2:09.95 2:21.30 2:25.33 2:11.70 |
| 17 | Vladimir Diakonov | 2:17.66 | 2:48.07 | 2:44.41 2:35.10 3:04.71 2:17.66 3:19.81 |
| 18 | Kaur Kenk | 2:58.11 | 3:16.12 | 2:58.11 3:43.97 3:04.61 3:09.28 3:34.48 |
| 19 | Gleb Bražnikov | 3:10.75 | 3:22.36 | 3:15.08 DNF 3:39.94 3:10.75 3:12.07 |