| 1 | Richard Jay S. Apagar | 54.58 | 58.22 | 1:04.30 56.96 1:01.86 55.83 54.58 |
| 2 | Marvin Llaneta | 1:18.31 | 1:21.72 | 1:19.94 1:27.28 1:25.00 1:20.21 1:18.31 |
| 3 | John Edison Ubaldo (ᜇ᜔ᜌᜓ︀ᜈ᜔ ᜁᜇᜒᜐᜓ︀ᜈ᜔ ᜂᜊᜎ᜔ᜇᜓ︀) | 1:22.43 | 1:26.34 | 1:23.66 1:25.16 1:33.50 1:22.43 1:30.19 |
| 4 | Rusty Louis Domingo | 1:35.59 | 1:46.28 | 1:51.31 1:35.59 1:51.50 2:33.06 1:36.02 |
| 5 | Carlo Nicolai Abana | 1:40.00 | 1:53.87 | 1:54.94 1:40.00 2:01.52 1:59.91 1:46.77 |
| 6 | Erwin Reyes | 1:50.47 | 2:15.87 | 2:02.71 2:34.08 1:50.47 2:41.02 2:10.83 |
| 7 | Rey Anthony Briguera | 2:16.69 | 2:40.49 | 2:38.71 2:36.97 2:16.69 2:45.78 DNF |
| 8 | Richmond Mico Rigor | 2:35.97 | DNF | 3:16.84 2:35.97 2:53.80 DNF DNF |
| 9 | Johnley Bibaoco | 3:00.43 | — | 3:10.06 3:00.43 3:25.27 — — |
| 10 | Albert Quiñones | 3:16.21 | — | 3:16.21 4:37.28 3:43.11 — — |