| 1 | Tomoya Iida (飯田朋也) | 32.22 | 38.78 | 41.15 32.22 39.40 37.86 39.09 |
| 2 | Makoto Takaoka (高岡誠) | 38.09 | 43.12 | 40.18 1:11.81 42.36 46.81 38.09 |
| 3 | Atsuto Takemura (竹村篤人) | 40.44 | 43.59 | 41.08 47.30 42.40 50.50 40.44 |
| 4 | Raphaël Pihet | 42.47 | 44.28 | 42.47 48.72 45.11 43.08 44.66 |
| 5 | Yota Ueda (上田陽太) | 40.33 | 44.81 | 45.28 44.11 40.33 45.03 47.44 |
| 6 | Rui-Jun Liu (劉睿鈞) | 43.15 | 47.39 | 43.15 50.30 50.69 44.81 47.06 |
| 7 | Wataru Hashimura (端村航) | 41.52 | 48.89 | 42.59 41.52 53.65 50.43 1:11.36 |
| 8 | Yusuke Takada (高田祐介) | 45.69 | 52.75 | 45.69 53.93 54.65 1:00.05 49.68 |
| 9 | Takayuki Tanaka (田中隆喜) | 51.47 | 59.26 | 1:02.28 1:03.52 51.47 51.97 1:04.34 |
| 10 | Matty Hiroto Inaba | 56.08 | 1:01.65 | 59.33 1:09.22 1:19.66 56.08 56.41 |
| 11 | Atsuki Harada (原田淳生) | 1:07.93 | 1:13.23 | 1:07.93 1:08.71 1:26.90 1:17.18 1:13.81 |
| 12 | Kengo Yamawaki (山脇憲吾) | 1:09.83 | 1:17.88 | 1:09.83 1:25.63 1:18.25 1:16.25 1:19.15 |
| 13 | Rintaro Miyazaki (宮崎倫太郎) | 1:10.11 | 1:22.02 | 1:34.09 1:10.11 1:29.88 1:24.72 1:11.47 |
| 14 | Kyota Shimada (嶋田恭大) | 1:24.47 | 1:31.44 | 1:24.47 1:36.56 1:36.36 1:31.68 1:26.27 |
| 15 | Takayuki Ida (井田貴之) | 1:42.90 | 1:56.30 | 1:53.00 2:07.28 1:48.63 1:42.90 2:09.38 |
| 16 | Sho Nishino (西野翔) | 1:48.53 | 1:58.99 | 1:48.53 1:54.16 2:02.63 2:00.19 2:06.96 |
| 17 | Hisao Ouchi (大内久夫) | 2:33.33 | 2:53.73 | 3:14.75 2:38.84 2:33.33 3:33.80 2:47.61 |
| 18 | Kazu Toyonaga (豊永和) | 2:14.84 | 3:26.47 | DNF 2:41.33 2:14.84 3:39.50 3:58.58 |
| 19 | Rin Taniguchi (谷口凜) | DNF | — | DNF DNF — — — |