| 1 | Ivan Lew Yi Wen (刘义文) | 36.88 | 39.95 | 36.88 44.53 47.72 38.29 37.03 |
| 2 | Teh Keng Foo (郑庆富) | 42.44 | 45.48 | 45.30 47.69 43.45 42.44 53.24 |
| 3 | Mohd Ashroof Bin Masri | 42.01 | 45.80 | 54.58 48.05 42.01 45.65 43.71 |
| 4 | Leow Yi Jun (廖艺畯) | 45.14 | 47.79 | 45.14 48.05 57.30 48.69 46.64 |
| 5 | Sean Then (邓宇恒) | 48.19 | 51.53 | 57.43 51.76 48.19 49.26 53.57 |
| 6 | Muhammad Hariz Bin Azizan | 47.81 | 52.56 | 52.90 52.53 59.92 47.81 52.25 |
| 7 | Jared Tee Wei Jin | 50.51 | 54.22 | 1:00.77 56.22 52.59 53.84 50.51 |
| 8 | Muhammad Razin Bin Roslan | 48.39 | 54.80 | 54.30 48.39 DNF 52.15 57.94 |
| 9 | Luqman Hakim Bin Hairil Azli | 51.36 | 55.43 | 56.74 57.12 56.37 53.19 51.36 |
| 10 | Muhammad Haziq Noreffendi | 53.75 | 56.08 | 55.83 53.75 57.25 58.90 55.17 |
| 11 | Adam Wong Wei Jiang | 47.77 | 57.14 | 47.77 1:15.57 53.28 49.74 1:08.40 |
| 12 | Siau Hong Da (蕭宏達) | 52.50 | 57.97 | 59.63 56.17 52.50 58.53 59.20 |
| 13 | Soh Li Jin | 53.41 | 59.48 | 53.56 1:05.66 1:06.66 59.23 53.41 |
| 14 | William Gan Wei Ren (颜伟仁) | 54.85 | 1:01.31 | 54.85 1:03.67 1:02.30 57.96 1:06.63 |
| 15 | Ng Soon Lin | 55.36 | 1:02.07 | 1:01.77 1:07.42 1:00.87 1:03.57 55.36 |
| 16 | Muhammad Syahmi | 56.70 | 1:02.85 | 57.47 56.70 1:03.34 1:11.82 1:07.75 |
| 17 | Tan Wei Ken | 50.33 | 1:03.27 | 1:13.96 50.33 1:11.29 1:01.29 57.23 |
| 18 | Ng Wai Hoe | 57.45 | 1:03.66 | 1:00.92 1:03.06 1:07.01 57.45 1:08.02 |
| 19 | Yap E. Jie | 53.53 | 1:05.10 | 1:12.13 53.53 1:04.94 1:01.24 1:09.11 |
| 20 | Ooi Zong Xin | 55.51 | 1:08.18 | DNF 55.51 1:06.30 1:12.91 1:05.33 |
| 21 | Lim Teik Han | 1:06.65 | 1:11.01 | 1:06.84 1:06.65 1:16.94 1:16.34 1:09.86 |
| 22 | Sulaiman Elias | 1:08.63 | 1:13.35 | 1:13.73 1:16.39 1:15.94 1:08.63 1:10.37 |
| 23 | Fauzurrahman | 1:06.23 | 1:14.92 | 1:14.06 1:18.17 DNF 1:06.23 1:12.53 |
| 24 | Ahmad Firas | 1:08.80 | 1:15.92 | 1:23.99 1:13.37 1:18.46 1:15.93 1:08.80 |
| 25 | Nazrin Afzal bin Mohd Basir | 1:04.93 | 1:16.49 | 1:23.26 1:10.19 DNF 1:04.93 1:16.01 |
| 26 | Ivan Lim Khai Ze | 1:11.59 | 1:21.08 | 1:13.45 1:26.26 1:38.01 1:11.59 1:23.54 |
| 27 | Alvin Chow Mun Sing | 1:11.16 | 1:23.59 | DNF 1:22.31 1:14.80 1:11.16 1:33.65 |
| 28 | Muhd Affiq Bin Amiruddin | 1:17.40 | 1:23.96 | DNF 1:17.40 1:24.71 1:23.34 1:23.83 |
| 29 | Muhammad Syafiyadiy bin Jamaludin | 1:10.91 | 1:31.41 | 1:36.46 1:10.91 1:37.04 1:35.51 1:22.27 |
| 30 | Michelle Chew Ai Phin (周爱萍) | 1:18.47 | 1:33.19 | 1:37.65 1:18.47 1:20.62 2:12.57 1:41.31 |
| 31 | Tock You Bin | 1:15.44 | DNF | DNF 1:15.44 1:18.28 1:16.00 DNF |
| 32 | Irfan Bin Aris | 1:17.00 | DNF | 1:17.00 DNF 1:20.41 DNF DNF |
| 33 | Ahmad Adam Syafiq Bin Ahmad Zaidi | 1:25.19 | DNF | 1:25.19 2:14.71 1:36.58 DNF DNS |
| 34 | Ahmad Hazim | 1:30.30 | — | 1:34.09 1:30.30 — — — |
| 35 | Hoo Jun Sheng | 1:31.76 | — | 2:04.44 1:31.76 — — — |
| 36 | Lee Hoween | 1:32.38 | — | 2:16.59 1:32.38 — — — |
| 37 | Jonathan Chin Wei | 1:40.04 | — | 1:40.04 1:44.94 — — — |
| 38 | Nabil Nur Aiman Bin Jasman | 1:40.64 | — | 2:08.18 1:40.64 — — — |
| 39 | Zulfahmi Bin Zailani | 1:42.78 | — | DNF 1:42.78 — — — |
| 40 | Henry Won Kai Sheng | 1:43.84 | — | 1:44.18 1:43.84 — — — |
| 41 | Liew Yee Voon (劉倚文) | 1:44.05 | — | 1:44.05 1:46.31 — — — |
| 42 | Muhammad Adzim Ariffi bin Mohd Ramzan | 1:52.46 | — | 2:19.30 1:52.46 — — — |
| 43 | Muhammad Asyraaf Haikal Bin M. Haikal | 2:00.66 | — | 2:39.41 2:00.66 — — — |
| 44 | Muhammad Arif Aiman bin Mohd Farizol | 2:01.94 | — | 2:23.71 2:01.94 — — — |
| 45 | Afif bin Saiful Firdaus | 2:03.48 | — | 3:07.17 2:03.48 — — — |
| 46 | Muhammad Rashid Elias | 2:08.37 | — | 2:38.50 2:08.37 — — — |
| 47 | Muhammad Din Bin Khairul Izman | 2:17.25 | — | 2:24.16 2:17.25 — — — |
| 48 | Ling Wei Shung | 3:21.19 | — | DNF 3:21.19 — — — |