| 1 | Leo Borromeo | 22.81 | 24.77 | 24.25 26.46 37.36 22.81 23.59 |
| 2 | Jansen Alvarez | 27.28 | 30.24 | 33.42 29.47 27.28 30.81 30.44 |
| 3 | Jose Polorhenzo Aquino | 28.12 | 31.58 | 28.12 31.48 30.78 32.73 32.49 |
| 4 | Miguel Gonzaga | 27.15 | 32.87 | 42.84 30.88 35.97 31.77 27.15 |
| 5 | Kirby Jay Caragan | 35.18 | 38.09 | 45.88 39.40 35.18 35.74 39.13 |
| 6 | Brian Acuña | 32.26 | 41.84 | 40.89 45.96 32.26 46.32 38.67 |
| 7 | Gabriel Angelo V. Hilado | 41.84 | 43.37 | DNF 41.84 42.44 42.58 45.08 |
| 8 | Bien Dranreb Gablines | 39.07 | 45.60 | 39.07 44.79 50.77 48.25 43.77 |
| 9 | John Gratian Magbanua | 42.77 | 46.34 | 42.77 50.65 50.58 45.52 42.91 |
| 10 | Jasper Lee Marbella | 46.06 | 47.87 | 46.06 56.28 47.65 48.91 47.06 |
| 11 | Raio Habana | 46.14 | 51.38 | 48.13 55.34 46.14 50.68 55.37 |
| 12 | Caleb Valenzuela | 47.60 | 51.52 | 53.18 54.22 53.37 48.02 47.60 |
| 13 | Ryan Retutal | 46.36 | 51.78 | 53.58 51.71 53.36 46.36 50.26 |
| 14 | Dan Eliezer R. Jakosalem | 48.79 | 54.41 | 1:26.29 48.79 56.54 56.23 50.47 |
| 15 | Lucas Solon | 50.97 | 55.53 | 57.20 51.50 57.88 50.97 DNF |
| 16 | Chrisgel G. Tubianosa | 47.87 | 55.66 | 49.27 59.16 47.87 59.26 58.54 |
| 17 | Ayle Jan C. Abelo | 52.21 | 56.26 | 1:13.94 54.63 59.41 54.75 52.21 |
| 18 | Ivan Keith Cariaga | 55.76 | 57.97 | 55.76 57.97 58.97 1:12.22 56.97 |
| 19 | Zaidan Zabala | 51.57 | 58.91 | 55.28 51.57 1:06.16 55.30 1:10.52 |
| 20 | Danielle Aaron C. Minguito | 50.69 | 1:00.00 | 50.69 59.70 DNF 1:02.58 57.73 |
| 21 | Nathan Daniel Chik | 49.53 | 1:01.10 | 1:00.36 49.53 1:08.75 1:09.53 54.19 |
| 22 | Alyssa Belle Yu | 52.43 | 1:01.87 | 1:07.00 52.43 1:02.38 56.22 1:07.34 |
| 23 | Marcus Angelo Murcia | 58.55 | 1:01.91 | 1:00.92 1:24.74 1:00.07 1:04.73 58.55 |
| 24 | Savion Romeo Matula | 57.90 | 1:04.68 | 1:07.04 1:15.42 1:02.28 57.90 1:04.71 |
| 25 | Railee Diocampo | 59.76 | 1:08.14 | 1:15.19 1:07.92 1:01.30 1:19.31 59.76 |
| 26 | Johannes Paul P. Lamosao | 1:02.41 | 1:10.70 | 1:19.30 1:02.41 1:08.19 DNF 1:04.60 |
| 27 | Harry Jacalan Delantes | 1:07.96 | 1:11.51 | 1:15.12 1:08.68 1:10.73 1:07.96 1:19.92 |
| 28 | Janahvelle Codilla Caracas | 1:09.25 | 1:16.00 | 1:22.57 1:09.25 1:09.72 1:33.56 1:15.70 |
| 29 | Vince Jareed Simaringa | 1:04.72 | 1:17.67 | 1:04.72 1:19.51 1:19.03 1:14.48 1:25.72 |
| 30 | Maria Florentina Isabel Perez | 1:09.57 | 1:21.69 | 1:09.57 1:51.35 1:12.22 1:23.64 1:29.20 |
| 31 | Rihannah Kadik Agbay | 1:04.73 | 1:39.28 | 1:48.00 1:04.73 1:46.83 1:42.73 1:28.27 |
| 32 | Nathaleo Pablo V. Olgina | 56.08 | DNF | 1:03.54 1:04.04 DNF DNF 56.08 |
| 33 | Bon Andrei Najarro | 1:13.28 | — | 1:13.28 1:13.36 — — — |
| 34 | Eduardo Lofranco Jr. | 1:24.89 | — | 1:24.89 1:27.55 — — — |
| 35 | Wesley Jessen B. Dicdiquin | 1:28.51 | — | 1:28.51 DNF — — — |
| 36 | Luke Dawson Chik | 1:29.98 | — | 1:29.98 1:35.80 — — — |
| 37 | Zildjian Nathanael M. Castillo | 1:36.20 | — | 1:36.20 1:44.72 — — — |